The fasta2Strcuture.pl script can convert a fasta file with multiple haplotypes per individual into an integer format accepted by STRUCTURE. The allelic dosage for a site is also calculated and this ...
Calculating the metrics for an input fasta file, formatting an assembly fasta file for blast, blast input gene fasta file to assembly blastdb, parse blast output file into .bp file, parse .bp file to ...
Our CIF to FASTA Converter is a powerful and user-friendly web tool to extract protein or nucleic acid sequence data from structural Crystallographic Information Files (CIF). It efficiently reads ...
The FASTA to NEXUS Converter is designed to bridge the gap between simple sequence storage and complex phylogenetic analysis. While the FASTA format is the universal standard for representing ...
Identity (%): sequence identity thresholds. Coverage (%): Alignment coverage of the leader sequence. Compression (%): percentage of the original size. Affected clusters: number of clusters with ...
FASTA and FASTQ are basic and ubiquitous formats for storing nucleotide and protein sequences. Common manipulations of FASTA/Q file include converting, searching, filtering, deduplication, splitting, ...
As a shortcut, we will use the Entrez "Gene" database to quickly access the amino acid sequence of a gene product. The amino acid sequence also could be obtained by searching protein sequence ...
With researchers in the omics space now generating terabytes of data in a single experiment, it’s important to understand how meaningful results can be derived from what looks like a string of random ...
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