Abstract: We present efficient cache-oblivious algorithms for some well-studied string problems in bioinformatics including the longest common subsequence, global pairwise sequence alignment and three ...
Safe and Complete Algorithms for Bioinformatics (SAFEBIO) was a project that took place during Mar 2020 - Feb 2025 at the University of Helsinki. It was funded by the European Research Council (ERC) ...
Programming language dominance in bioinformatics seems to closely follows methodological shifts in the field. Python’s rise reflects its central role in modern data-driven and AI-enabled biology.
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